single-cell sequencing by MDA of Oceanospirillales bacterium JCVI-SC ... - SRA

SRX039154: single-cell sequencing by MDA of Oceanospirillales bacterium JCVI-SC AAA002
1 LS454 (454 GS FLX Titanium) run: 142,969 spots, 65.8M bases, 150.9Mb downloads

Submitted by: J. Craig Venter Institute

Study: Oceanospirillales bacterium JCVI-SC AAA002 Genome sequencing project

PRJNA61959 • SRP005441 • All experiments • All runs

show Abstracthide Abstract

Partial whole-genome 454-generated sequence data from a single cell using multiple displacement amplification (MDA). This is a single cell collected from an extreme deep ocean environment, 6,000 m depth within the Puerto Rico Trench (PRT), and sorted using FACS. The genome of the single cell was amplified using multiple displacement amplification (MDA) and partially sequenced using 454 pyrosequencing technology.

Sample: Oceanospirillales bacterium JCVI-SC AAA002

SAMN00198582 • SRS160196 • All experiments • All runs

Organism: Oceanospirillales bacterium JCVI-SC AAA002

Library:

Name: BACTERIODETES-BP3KB-A10NB-01-630

Instrument: 454 GS FLX Titanium

Strategy: WGS

Source: GENOMIC

Selection: other

Layout: PAIRED

Spot descriptor:

5 forward

Experiment attributes:

library_strategy: MDA

Runs: 1 run, 142,969 spots, 65.8M bases, 150.9Mb

Run	# of Spots	# of Bases	Size	Published
SRR095663	142,969	65.8M	150.9Mb	2011-01-25

ID:: 46580

SRA

Sequence Read Archive

Result Filters

Send to:

Supplemental Content

Related information

Search details

Recent activity