Illumina HiSeq 2500 sequencing of SAMD00213426 - SRA

DRX209908: Illumina HiSeq 2500 sequencing of SAMD00213426
1 ILLUMINA (Illumina HiSeq 2500) run: 22.9M spots, 1.2G bases, 472.5Mb downloads

Submitted by: RIKEN

Study: Transcriptomes in tissues of crab-eating macaques

PRJDB9546 • DRP005990 • All experiments • All runs

show Abstracthide Abstract

This study aims to determine transcription start sites and gene structure of crab-eating macaques (Macaca fascicularis) in a genome-wide manner. To this end, we extracted total RNA in tissue samples from the whole body of crab-eating macaques, and then performed CAGE (Cap Analysis of Gene Expression) and RNA-seq.

Sample: MidbrainRight of a crab-eating macaque [CE1976F; Female; 6 y 8 m old]

SAMD00213426 • DRS129878 • All experiments • All runs

Organism: Macaca fascicularis

Library:

Instrument: Illumina HiSeq 2500

Strategy: OTHER

Source: TRANSCRIPTOMIC

Selection: CAGE

Layout: SINGLE

Construction protocol: "Morioka M.S. et al. (2020) Cap Analysis of Gene Expression (CAGE): A Quantitative and Genome-Wide Assay of Transcription Start Sites. In: Boegel S. (eds) Bioinformatics for Cancer Immunotherapy. Methods in Molecular Biology, vol 2120. Humana, New York, NY"

Spot descriptor:

1 forward

Runs: 1 run, 22.9M spots, 1.2G bases, 472.5Mb

Run	# of Spots	# of Bases	Size	Published
DRR219595	22,884,515	1.2G	472.5Mb	2020-04-04

ID:: 10497349

SRA

Sequence Read Archive

Result Filters

Send to:

Supplemental Content

Related information

Recent activity