Illumina HiSeq 2500 sequencing of SAMD00213469 - SRA

DRX209931: Illumina HiSeq 2500 sequencing of SAMD00213469
1 ILLUMINA (Illumina HiSeq 2500) run: 30.6M spots, 1.6G bases, 596.1Mb downloads

Submitted by: RIKEN

Study: Transcriptomes in tissues of crab-eating macaques

PRJDB9546 • DRP005990 • All experiments • All runs

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This study aims to determine transcription start sites and gene structure of crab-eating macaques (Macaca fascicularis) in a genome-wide manner. To this end, we extracted total RNA in tissue samples from the whole body of crab-eating macaques, and then performed CAGE (Cap Analysis of Gene Expression) and RNA-seq.

Sample: MedialFrontalGyrusRight of a crab-eating macaque [CE1909F; Female; 6 y 4 m old]

SAMD00213469 • DRS129901 • All experiments • All runs

Organism: Macaca fascicularis

Library:

Instrument: Illumina HiSeq 2500

Strategy: OTHER

Source: TRANSCRIPTOMIC

Selection: CAGE

Layout: SINGLE

Construction protocol: "Morioka M.S. et al. (2020) Cap Analysis of Gene Expression (CAGE): A Quantitative and Genome-Wide Assay of Transcription Start Sites. In: Boegel S. (eds) Bioinformatics for Cancer Immunotherapy. Methods in Molecular Biology, vol 2120. Humana, New York, NY"

Spot descriptor:

1 forward

Runs: 1 run, 30.6M spots, 1.6G bases, 596.1Mb

Run	# of Spots	# of Bases	Size	Published
DRR219618	30,595,642	1.6G	596.1Mb	2020-04-04

ID:: 10497372

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