Illumina HiSeq 2500 sequencing of SAMD00213555 - SRA

DRX210004: Illumina HiSeq 2500 sequencing of SAMD00213555
1 ILLUMINA (Illumina HiSeq 2500) run: 28.5M spots, 1.5G bases, 554.8Mb downloads

Submitted by: RIKEN

Study: Transcriptomes in tissues of crab-eating macaques

PRJDB9546 • DRP005990 • All experiments • All runs

show Abstracthide Abstract

This study aims to determine transcription start sites and gene structure of crab-eating macaques (Macaca fascicularis) in a genome-wide manner. To this end, we extracted total RNA in tissue samples from the whole body of crab-eating macaques, and then performed CAGE (Cap Analysis of Gene Expression) and RNA-seq.

Sample: KidneyCortex of a crab-eating macaque, techRep 5 [CE1976F; Female; 6 y 8 m old]

SAMD00213555 • DRS129974 • All experiments • All runs

Organism: Macaca fascicularis

Library:

Instrument: Illumina HiSeq 2500

Strategy: OTHER

Source: TRANSCRIPTOMIC

Selection: CAGE

Layout: SINGLE

Construction protocol: "Morioka M.S. et al. (2020) Cap Analysis of Gene Expression (CAGE): A Quantitative and Genome-Wide Assay of Transcription Start Sites. In: Boegel S. (eds) Bioinformatics for Cancer Immunotherapy. Methods in Molecular Biology, vol 2120. Humana, New York, NY"

Spot descriptor:

1 forward

Runs: 1 run, 28.5M spots, 1.5G bases, 554.8Mb

Run	# of Spots	# of Bases	Size	Published
DRR219691	28,526,139	1.5G	554.8Mb	2020-04-04

ID:: 10497445

SRA

Sequence Read Archive

Result Filters

Send to:

Supplemental Content

Related information

Recent activity