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ERX1678501: Illumina MiSeq paired end sequencing
1 ILLUMINA (Illumina MiSeq) run: 4.4M spots, 2.2G bases, 1.1Gb downloads

Submitted by: The John Innes Centre
Study: Cloning disease resistance genes against late blight of potato
show Abstracthide Abstract
Late blight, a major disease of potato and tomato caused by Phytophthora infestans still poses a great threat to potato and tomato production. The deployment of resistance (R) genes in breeding programs has a potential to be a more sustainable and durable way of protecting plants from late blight than chemical control. We recently demonstrated that Solanum americanum is a new source of resistance genes against P. infestans. We applied RenSeq (Resistant gene Enrichment and Sequencing) method in combination with Illumina and PacBio sequencing technologies in F2 bulk susceptible as well as in resistant and susceptible parents. Mapping and SNP calling pipelines identified Rpi as a candidate gene responsible for resistance to P. infestans.
Sample: Rapid identification disease resistance genes from Solanum americanum by resistance gene enrichment sequencing (RenSeq)
SAMEA4416263 • ERS1327712 • All experiments • All runs
Library:
Name: unspecified
Instrument: Illumina MiSeq
Strategy: AMPLICON
Source: TRANSCRIPTOMIC
Selection: PCR
Layout: PAIRED
Runs: 1 run, 4.4M spots, 2.2G bases, 1.1Gb
Run# of Spots# of BasesSizePublished
ERR16079344,351,0822.2G1.1Gb2022-03-24

ID:
20814729

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