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ERX624129: Illumina HiSeq 2000 sequencing
1 ILLUMINA (Illumina HiSeq 2000) run: 876,649 spots, 87.7M bases, 55.4Mb downloads

Design: mRNA libray
Submitted by: IRD
Study: Gene expression inheritance in hybrids
show Abstracthide Abstract
Hybridization generates novel phenotypes by conciliating divergent genomes and regulatory networks in the same cellular context. Despite a few solid studies, changes in molecular regulatory molecules that changes triggering variable gene expression are still largely unknown. To understand the rewiring of gene expression in hybrids, we performed genome-wide analyses of inheritance of gene expression inheritance, cis- and trans-regulatory divergences, and variations in allele-specific expression in interspecific Coffea hybrids using RNA-seq technology.
Sample: Exp-leaf
SAMEA3111516 • ERS578724 • All experiments • All runs
Library:
Name: H16
Instrument: Illumina HiSeq 2000
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: Oligo-dT
Layout: SINGLE
Construction protocol: TrueSeq RNAsample kit
Runs: 1 run, 876,649 spots, 87.7M bases, 55.4Mb
Run# of Spots# of BasesSizePublished
ERR668825876,64987.7M55.4Mb2015-04-20

ID:
1452750

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