U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

SRX1567553: RNA-Seq of hooded seal brain, reox 20min
1 ILLUMINA (NextSeq 500) run: 21.2M spots, 6.4G bases, 2.8Gb downloads

Design: A sequencing library for paired-end sequencing of 125nt was generated from 1µg RNA, and sequencing was performed with a NextSeq500
Submitted by: University of Hamburg
Study: Cystophora cristata Raw sequence reads
show Abstracthide Abstract
Brain slices from the hooded seal were taken from layer V of the visual cortex of the brain of the hooded seal. After equilibration hypoxia was induced by floating the slices with N2 for 1 h. Subsequently, the slices were reoxygenated for 20 min. Three different samples (with n=3 for each) were taken control slices that had been kept for 110 min at normoxia. From each sample, the mRNA was extracted and submitted to Illumina paired-end sequencing. Additionally an untreated cortical sample of the hooded seal was used for RNA extraction and submitted to Illumina paired-end sequencing.
Sample: Ccr Reox
SAMN03418040 • SRS1281675 • All experiments • All runs
Library:
Name: Ccr2R20_S7
Instrument: NextSeq 500
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: RANDOM
Layout: PAIRED
Runs: 1 run, 21.2M spots, 6.4G bases, 2.8Gb
Run# of Spots# of BasesSizePublished
SRR315615721,204,2446.4G2.8Gb2016-02-14

ID:
2217362

Supplemental Content

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...