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SRX2791708: Whole transcriptome sequencing of Zeugodacus cucumis
1 ILLUMINA (NextSeq 500) run: 22.8M spots, 6.1G bases, 2.7Gb downloads

Design: Trizol RNA extraction, library prep and sequencing as per manufacturer's instructions
Submitted by: QUT
Study: Transcriptome sequencing of Bactrocera and Zeugodacus fruit flies
show Abstracthide Abstract
Development of novel molecular methods for accurate and economical identification of species has become critical both for pure biological research and in a wide range of applied areas. The most widely used current molecular diagnostic tool, the mitochondrial cytochrome c oxidase subunit 1 gene (CO1), the so-called 'DNA barcode', has been highly criticised and is known to be ineffective at distinguishing species in many groups. To address this, we used transcriptomes and a novel analytical workflow to develop new potential diagnostic markers.
Sample: Whole transcriptome sequencing for Zeugodacus cucumis
SAMN06909151 • SRS2204208 • All experiments • All runs
Library:
Name: Zcuc
Instrument: NextSeq 500
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: cDNA
Layout: PAIRED
Spot descriptor:
forward102  reverse

Runs: 1 run, 22.8M spots, 6.1G bases, 2.7Gb
Run# of Spots# of BasesSizePublished
SRR551835922,797,9476.1G2.7Gb2017-07-31

ID:
4025743

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