GSM2711708: CMC control fish 1; Dicentrarchus labrax; RNA-Seq - SRA

SRX3021065: GSM2711708: CMC control fish 1; Dicentrarchus labrax; RNA-Seq
1 ILLUMINA (Illumina HiSeq 2000) run: 52.2M spots, 10.5G bases, 6.5Gb downloads

Submitted by: NCBI (GEO)

Study: Cell-mediated cytotoxicity (CMC) in European sea bass leucocytes

PRJNA395101 • SRP113028 • All experiments • All runs

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Sea bass leucocytes were incubated with mock- or NNV-infected DLB-1 cell line and the cell-mediated cytotoxic activity determined Overall design: We examine the transcriptomic profile of leucocytes under cell-mediated cytotoxicity

Sample: CMC control fish 1

SAMN07370991 • SRS2370528 • All experiments • All runs

Organism: Dicentrarchus labrax

Library:

Instrument: Illumina HiSeq 2000

Strategy: RNA-Seq

Source: TRANSCRIPTOMIC

Selection: cDNA

Layout: PAIRED

Construction protocol: Total RNA from cells was isolated by PureLink® RNA Mini Kit Libraries from the total RNA were prepared using the TruSeq®Stranded mRNA LT Sample Prep Kit from 0,5 µg of RNA RNA-seq. Each library was sequenced using TruSeq SBS Kit v3-HS, in paired end mode with the read length 2x76bp

Experiment attributes:

GEO Accession: GSM2711708

Links:

NCBI link: NCBI Entrez (gds)

Runs: 1 run, 52.2M spots, 10.5G bases, 6.5Gb

Run	# of Spots	# of Bases	Size	Published
SRR5851409	52,192,225	10.5G	6.5Gb	2017-07-21

ID:: 4297162

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