Sunflower mycorrhizal roots RNA-seq. H. annuus roots of control ( C )... - SRA

SRX3373358: Sunflower mycorrhizal roots RNA-seq. H. annuus roots of control ( C ) and inoculated ( M ) with Rhizoglomus irregulare after 4 and 16 days of symbiosis. Sequence data were generated by deep sequencing using Illumina HiSeq.
1 ILLUMINA (Illumina HiSeq 2500) run: 52.3M spots, 5.2G bases, 2.2Gb downloads

Design: mRNA was used for the construction of single-end libraries according to the standard Illumina protocol (Illumina, San Diego, CA, USA).

Submitted by: University of Pisa

Study: Helianthus annuus cultivar:HA412-HO Transcriptome or Gene expression

PRJNA417544 • SRP124596 • All experiments • All runs

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To investigate the molecular bases of arbuscular symbiosis in sunflower, we harvested roots from control and from 4 and 16 days inoculated roots. RNAs were isolated from root cells, with 3 biological replicates for each time point and treatment. RNA sequencing was performed with Illumina technology.

Sample: Plant sample from Helianthus annuus

SAMN07998787 • SRS2670619 • All experiments • All runs

Organism: Helianthus annuus

Library:

Name: HA_myc_M4_2

Instrument: Illumina HiSeq 2500

Strategy: RNA-Seq

Source: TRANSCRIPTOMIC

Selection: cDNA

Layout: SINGLE

Runs: 1 run, 52.3M spots, 5.2G bases, 2.2Gb

Run	# of Spots	# of Bases	Size	Published
SRR6267163	52,342,074	5.2G	2.2Gb	2017-11-08

ID:: 4710023

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