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SRX365514: Aedes albopictus male reproductive organs transcriptome
1 LS454 (454 GS FLX) run: 656,089 spots, 347.6M bases, 764.5Mb downloads

Design: cDNA library sequencing was conducted at the Genomics Core Facility of the Life Sciences Core Laboratories Center at Cornell University. The cDNA was fragmented and converted to sequencing libraries using the Roche/454 Rapid Library preparation kits and protocols (454 Life Sciences, Branford, CT). Each sequencing library was created independently and tagged with a multiplex identifier (MID) using the Roche/454 Rapid Library MID Adaptors kit (454 Life Sciences, Branford, CT). The final libraries were quantified using fluorometry and average fragment sizes were determined using an Agilent Bioanalyzer 2100 (Agilent technologies, Santa Clara, CA). The samples were pooled in equimolar ratios, diluted, and subjected to emulsion PCR according to the manufacturer's protocols (454 Life Sciences, Branford, CT). The pooled libraries were sequenced on a full PicoTiterPlate (PTP) on a GS-FLX sequencer using the Titanium chemistry (454 Life Sciences, Branford, CT). Image processing, basecalling, separation by MID, and adaptor trimming were performed using the bundled data collection and analysis software.
Submitted by: (NIAID-MDS)
Study: Aedes albopictus reproductive organs
show Abstracthide Abstract
The Asian tiger mosquito (Aedes albopictus) is an important vector for pathogens affecting human health, including the organisms that cause dengue and Chikungunya viruses. It is also one of the world's fastest-spreading invasive animal species. For these reasons, it is of crucial importance to identify strategies for controlling the reproduction and spread of Ae. albopictus. During mating, seminal fluid proteins (Sfps) are transferred from males to females, and these Sfps modulate female behavior and physiology in ways that influence feeding and reproduction. Despite the known importance of Sfps on female reproductive behavior, the identity of Sfps in Ae. albopictus has not previously been reported. In this study we used transcriptomics and proteomics to identify 198 Sfps in Ae. albopictus. We discuss the potential functions of the Ae. albopictus Sfps in relation to female post-mating changes. Furthermore, we compare the sequences of these Sfps with proteins, including Sfps, reported for several other species, including the yellow fever mosquito Ae. aegypti and the malaria mosquito Anopheles gambiae. While only 72 (36.4%) of the Ae. albopictus Sfps have putative orthologs in Ae. aegypti, suggesting a low conservation of the complement of Sfps in the two species, we find no evidence for positive selection in the Sfps shared between the species, suggesting a high conservation of those Sfps shared by the two species. Our results provide important insights into the evolution and ecology of Ae. albopictus. They also pave the way for future studies to investigate the roles of individual Sfps on feeding and reproduction in this species. Such studies have the potential to inform strategies for managing the spread and rate of disease transmission of Ae. albopictus.
Sample: Aedes albopictus male reproductive organs
SAMN02378346 • SRS491893 • All experiments • All runs
Library:
Name: Albie_male
Instrument: 454 GS FLX
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: RANDOM
Layout: SINGLE
Spot descriptor:
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Runs: 1 run, 656,089 spots, 347.6M bases, 764.5Mb
Run# of Spots# of BasesSizePublished
SRR1013510656,089347.6M764.5Mb2014-04-18

ID:
522457

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