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SRX3775629: RNA-Seq of P. rapae: 72h eggs on leaves_Rep1
1 ILLUMINA (Illumina HiSeq 2500) run: 26.2M spots, 1.3G bases, 488.5Mb downloads

Design: RNA was extracted using TRIzol Reagent and the RNA-seq libraries were generated using an Illumina TruSeq Stranded mRNA Library Prep Kit
Submitted by: University of Chicago
Study: The molecular genetic basis of herbivory between butterflies and their host-plants
show Abstracthide Abstract
Here we use multiple genome-wide approaches to map the molecular basis of herbivory from both plant and insect perspectives, focusing on butterflies and their larval host-plants. Parallel genome-wide association studies in the Cabbage White butterfly, Pieris rapae, and its host-plant, Arabidopsis thaliana, pinpointed a small number of butterfly and plant genes that influenced herbivory. These genes, along with much of the genome, were regulated in a dynamic way over the time course of the feeding interaction. Comparative analyses, including diverse butterfly/plant systems, showed a variety of genome-wide responses to herbivory, yet a core set of highly conserved genes in butterflies as well as their host-plants. These results greatly expand our understanding of the genomic causes and evolutionary consequences of ecological interactions across two of Nature's most diverse taxa, butterflies and flowering plants.
Sample:
SAMN08648809 • SRS3029783 • All experiments • All runs
Organism: Pieris rapae
Library:
Name: Sample_MK7
Instrument: Illumina HiSeq 2500
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: Oligo-dT
Layout: SINGLE
Runs: 1 run, 26.2M spots, 1.3G bases, 488.5Mb
Run# of Spots# of BasesSizePublished
SRR681862626,189,7711.3G488.5Mb2018-08-10

ID:
5206015

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