RNA-seq of Penaeus monodon: Adult male male gonad - SRA

SRX3822699: RNA-seq of Penaeus monodon: Adult male male gonad
1 ILLUMINA (Illumina HiSeq 2500) run: 10.2M spots, 2.6G bases, 1.1Gb downloads

Design: Libraries were prepared using the TruSeq Stranded mRNA Library Preparation Kit (Illumina) according to established protocols. Cluster generation was performed on a cBot with HiSeq PE Cluster Kit v4 - cBot and sequencing was done on a HiSeq 2500 using a HiSeq SBS Kit. The Hiseq 2500 was operating with HiSeq Control Software v2.2.68 and base-calling was performed with RTA v1.18.66.3.

Submitted by: James Cook University

Study: Multi-tissue Assembly of Penaeus monodon Transcriptome

PRJNA421400 • SRP127068 • All experiments • All runs

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This project aimed at producing a comprehensive tissue-specific transcriptome of the black tiger prawn. To this effect, we sequenced three replicates each from nine different tissues: eyestalk (EY); stomach (ST); female gonad (FG); male gonad (MG); gill (GI); haemoplymph (HL); hepatopancrease (HP); lymphoid organ (LO) and muscle (MU). In addition, one pooled replicate was sequenced from each from eight larval stages: embryo (E), nauplii (N), zoea (Z), Mysis (M), post larval days 1 (PL01), 4 (PL04), 10 (PL10) and 15 (PL15).

Sample:

SAMN08741508 • SRS3072356 • All experiments • All runs

Organism: Penaeus monodon

Library:

Name: PMM04_MG_2

Instrument: Illumina HiSeq 2500

Strategy: RNA-Seq

Source: TRANSCRIPTOMIC

Selection: PolyA

Layout: PAIRED

Runs: 1 run, 10.2M spots, 2.6G bases, 1.1Gb

Run	# of Spots	# of Bases	Size	Published
SRR6868120	10,242,868	2.6G	1.1Gb	2019-02-13

ID:: 5260033

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