RNA-Seq of corn snake posterior trunk 3.5 dpo, replicate 2 - SRA

SRX3822949: RNA-Seq of corn snake posterior trunk 3.5 dpo, replicate 2
1 ILLUMINA (Illumina HiSeq 2500) run: 38.3M spots, 3.8G bases, 2.2Gb downloads

Design: Libraries were constructed with the Illumina TruSeq stranded mRNA protocol, with polyA selection.

Submitted by: Universite Claude Bernard - Lyon 1, CNRS

Study: Comparative transcriptomics of mouse and corn snake tail development

PRJNA439191 • SRP136054 • All experiments • All runs

show Abstracthide Abstract

To compare gene expression patterns between mouse and corn snake tail development, we generated RNA sequencing data for 5 time points for the mouse (E9.5 to E13.5) and for 4 time points for the corn snake (day 2.5 to 5.5 post oviposition). Using this dataset, we identified numerous instances of species-specific temporal variations in gene expression, including developmental genes involved in anterior/posterior patterning.

Sample: corn snake 3.5 dpo replicate 2

SAMN08742071 • SRS3072560 • All experiments • All runs

Organism: Pantherophis guttatus

Library:

Name: EG3_2

Instrument: Illumina HiSeq 2500

Strategy: RNA-Seq

Source: TRANSCRIPTOMIC

Selection: cDNA

Layout: SINGLE

Runs: 1 run, 38.3M spots, 3.8G bases, 2.2Gb

Run	# of Spots	# of Bases	Size	Published
SRR6868480	38,296,466	3.8G	2.2Gb	2019-12-01

ID:: 5260283

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