TSWV-first instar larvae (L1) Biorep 2 - SRA

SRX4159455: TSWV-first instar larvae (L1) Biorep 2
1 ILLUMINA (Illumina HiSeq 2000) run: 31M spots, 3.1G bases, 2Gb downloads

Design: Trizol isolation of total RNA from pool of larval thrips, Truseq using oligodT primers

Submitted by: NC State University

Study: Transcriptome response of Frankliniella occidentalis (western flower thrips) to tomato spotted wilt virus (TSWV) infection

PRJNA454326 • SRP144102 • All experiments • All runs

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The goal of this project was to identify TSWV-responsive genes in western flower thrips bodies during virus infection through thrips development. Illumina Hiseq2000 generated single-end reads for 18 libraries representing 2 treatments (+/- TSWV) x 3 developmental stages [first instar larvae (L1), prepupae (P1) and adults (mix of females and males, 24-hours post eclosion] x 3 biological replications.

Sample: TSWV-first instar larvae (L1) Biorep 2

SAMN09325343 • SRS3371834 • All experiments • All runs

Organism: Frankliniella occidentalis

Library:

Name: V L1-21 Rep2

Instrument: Illumina HiSeq 2000

Strategy: RNA-Seq

Source: TRANSCRIPTOMIC

Selection: RT-PCR

Layout: SINGLE

Runs: 1 run, 31M spots, 3.1G bases, 2Gb

Run	# of Spots	# of Bases	Size	Published
SRR7255046	30,970,227	3.1G	2Gb	2018-06-04

ID:: 5646136

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