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SRX4476869: strand-specific RNA sequencing of Ovis aries longissimus dorsi sample OAR_USU_Benz2616_MUSLD
1 ILLUMINA (Illumina HiSeq 2000) run: 45.7M spots, 9.2G bases, 6Gb downloads

Design: strand-specific RNA sequencing of Ovis aries longissimus dorsi sample OAR_USU_Benz2616_MUSLD
Submitted by: Baylor College of Medicine (BCM)
Study: Ovis aries Rambouillet Genome sequencing and assembly
PRJNA414087 • SRP125115 • All experiments • All runs
show Abstracthide Abstract
The data includes Pacific Biosciences long-read data for de novo contig assembly, Illumina short-read data for base-quality polishing, and Hi-C Illumina data for genomic scaffolding.
Sample: skeletal muscle - longissimus dorsi (thoracis/ribeye/loin)
SAMEA104494974 • SRS3413648 • All experiments • All runs
Organism: Ovis aries
Library:
Name: RAMBKW.6005-MUS-LD-Bentz.2016-1_2AMP
Instrument: Illumina HiSeq 2000
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: PolyA
Layout: PAIRED
Spot descriptor:
1  forward102  reverse

Pipeline: show...hide...
NameStepPrev StepProgramVersion
Base Caller1NILCasava1.8.3
Quality Scores21Casava1.8.3
Runs: 1 run, 45.7M spots, 9.2G bases, 6Gb
Run# of Spots# of BasesSizePublished
SRR761207345,726,4309.2G6Gb2018-07-27

ID:
6062760

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