RNA-seq of Cyprinus carpioigf3-dsRNA-2 - SRA

SRX4778970: RNA-seq of Cyprinus carpioigf3-dsRNA-2
1 ILLUMINA (HiSeq X Ten) run: 65.2M spots, 19.5G bases, 6.6Gb downloads

Design: constructed using NEBNext Ultra Directional RNA Library Prep Kit for Illumina (NEB, Ipswich, MA, USA) after removal of ribosomal RNA by the Epicentre Ribo-zero rRNA Removal Kit (Epicentre, Madison, WI, USA)

Submitted by: Freshwater Fisheries Research Center of Chinese Academy of Fishery Sciences

Study: Cyprinus carpio strain:FFRC | breed:Artificial breeding Genome sequencing

PRJNA493964 • SRP162956 • All experiments • All runs

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In the present study, we used NGS to characterise lncRNA-seq of control- and igf3 knockdown-treatment Cyprinus carpio gonad to exlplore the molecular mechanism of igf3. We want to identified a certain amount of igf3-related differential expressed mRNAs and lncRNAs to elucidate the role of igf3 in the gonadal development of common carp.

Sample: lncRNA sequencing

SAMN10146829 • SRS3859934 • All experiments • All runs

Organism: Cyprinus carpio

Library:

Name: igf3-dsRNA-2

Instrument: HiSeq X Ten

Strategy: RNA-Seq

Source: TRANSCRIPTOMIC

Selection: RANDOM PCR

Layout: PAIRED

Runs: 1 run, 65.2M spots, 19.5G bases, 6.6Gb

Run	# of Spots	# of Bases	Size	Published
SRR7944795	65,154,681	19.5G	6.6Gb	2019-01-13

ID:: 6464174

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