GSM1370008: SW_WB02_F1_UWF; Acyrthosiphon pisum; RNA-Seq - SRA

SRX518191: GSM1370008: SW_WB02_F1_UWF; Acyrthosiphon pisum; RNA-Seq
1 ILLUMINA (Illumina HiSeq 2000) run: 101.3M spots, 10.2G bases, 6.1Gb downloads

Submitted by: Gene Expression Omnibus (GEO)

Study: Gene expression profiling of 5 pea aphid morphs

PRJNA244726 • SRP041208 • All experiments • All runs

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Purpose: Identify differentially expressed genes between 5 pea aphid morphs Methods: Collected whole bodies of 30 adult aphids of each of the five pea morphs and three clones (total of 15 samples) Overall design: 5 pea aphid morphs * 3 genotypes = 15 samples

Sample: SW_WB02_F1_UWF

SAMN02728364 • SRS592847 • All experiments • All runs

Organism: Acyrthosiphon pisum

Library:

Instrument: Illumina HiSeq 2000

Strategy: RNA-Seq

Source: TRANSCRIPTOMIC

Selection: cDNA

Layout: SINGLE

Construction protocol: RNA was extracted using a phenol/chloroform extraction. RNA was quantified by Qubit and the quality was checked by Bioanalyzer (Agilent) RNA sequencing libraries were constructed per manufacturer instructions with sample-specific tags (Illumina) and sequenced on an Illumina HiSeq 2000 sequence analyzer

Experiment attributes:

GEO Accession: GSM1370008

Links:

External link: GEO Sample GSM1370008

NCBI link: NCBI Entrez (gds)

Runs: 1 run, 101.3M spots, 10.2G bases, 6.1Gb

Run	# of Spots	# of Bases	Size	Published
SRR1239440	101,313,506	10.2G	6.1Gb	2014-06-04

ID:: 717838

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Sequence Read Archive

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