RNA-Seq of fathead minnow exposed to diluted bitumen: sub-adult liver - SRA

SRX5759087: RNA-Seq of fathead minnow exposed to diluted bitumen: sub-adult liver
1 ILLUMINA (NextSeq 500) run: 24.8M spots, 1.9G bases, 771.1Mb downloads

Design: cDNA libraries prepared using NEBNext Ultra II RNA Directional Library Prep Kit for Illumina with NEBNext Poly(A) Isolation Module using 500 ng of total RNA as input

Submitted by: University of California, Riverside

Study: Transcriptomic responses to water accommodated diluted bitumen exposure in sub-adult fathead minnows (Pimephales promelas)

PRJNA539967 • SRP193989 • All experiments • All runs

show Abstracthide Abstract

Whole-transcriptome sequencing of diluted bitumen-exposed fathead minnow (Pimephales promelas) livers was completed in order to identify the mechanisms of toxicity of diluted bitumen. This study will be the first to assess differential gene expression in fish following diluted bitumen exposure.

Sample: Low 1

SAMN11518937 • SRS4694224 • All experiments • All runs

Organism: Pimephales promelas

Library:

Name: ACAGTG

Instrument: NextSeq 500

Strategy: RNA-Seq

Source: TRANSCRIPTOMIC

Selection: cDNA

Layout: SINGLE

Runs: 1 run, 24.8M spots, 1.9G bases, 771.1Mb

Run	# of Spots	# of Bases	Size	Published
SRR8979746	24,847,430	1.9G	771.1Mb	2019-08-01

ID:: 7747478

SRA

Sequence Read Archive

Result Filters

Send to:

Supplemental Content

Related information

Recent activity