Helianthus annuus Genome Sequencing Using RNA Seq: sample CN42253_S53 - SRA

SRX5888361: Helianthus annuus Genome Sequencing Using RNA Seq: sample CN42253_S53
1 ILLUMINA (Illumina HiSeq 2500) run: 10.4M spots, 2.6G bases, 889.6Mb downloads

Design: RNA: Qiagen RNEasy Plant Mini, Library: Lexogen SENSE mRNA-Seq v2, Seq: Single HiSeq lane with SBS v4 2x125 bases

Submitted by: Agriculture & Agri-Food Canada

Study: Helianthus annuus Genome Sequencing Using RNA Seq

PRJNA543138 • SRP199315 • All experiments • All runs

show Abstracthide Abstract

A population of 72 sunflower accessions with varying germination rates was sequenced using RNA Seq. Single nucleotide polymorphisms (SNPs) were detected with a focus placed on those associated with deleterious changes for the purpose of inferring genetic variability.

Sample:

SAMN11807895 • SRS4810529 • All experiments • All runs

Organism: Helianthus annuus

Library:

Name: CN42253_S53

Instrument: Illumina HiSeq 2500

Strategy: RNA-Seq

Source: TRANSCRIPTOMIC

Selection: PolyA

Layout: PAIRED

Runs: 1 run, 10.4M spots, 2.6G bases, 889.6Mb

Run	# of Spots	# of Bases	Size	Published
SRR9114068	10,371,931	2.6G	889.6Mb	2020-06-01

ID:: 7910153

SRA

Sequence Read Archive

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