GSM4280336: NS-20-D; Nematostella vectensis; RNA-Seq - SRA

SRX7622559: GSM4280336: NS-20-D; Nematostella vectensis; RNA-Seq
6 ILLUMINA (Illumina HiSeq 2500) runs: 3.1M spots, 315.1M bases, 109.7Mb downloads

Submitted by: NCBI (GEO)

Study: Geographical temperature stress in the sea anemone Nematostella vectensis

PRJNA602807 • SRP244240 • All experiments • All runs

show Abstracthide Abstract

Gene expression of Nematostella vectensis from 5 different locations under chronic (30 day) temperature stress Overall design: Anemones were collected from 5 different locations (MA, ME, NC, SC, NS) and were chronically exposed to a range of temperature stresses (+/- 2C from that location temperature average)

Sample: NS-20-D

SAMN13908003 • SRS6054560 • All experiments • All runs

Organism: Nematostella vectensis

Library:

Instrument: Illumina HiSeq 2500

Strategy: RNA-Seq

Source: TRANSCRIPTOMIC

Selection: cDNA

Layout: SINGLE

Construction protocol: RNA was extracted from whole organisms using Ambion RNAqueous extraction kit. Libraries were prepared as in Meyer et al. (2011)

Experiment attributes:

GEO Accession: GSM4280336

Links:

NCBI link: NCBI Entrez (gds)

Runs: 6 runs, 3.1M spots, 315.1M bases, 109.7Mb

Run	# of Spots	# of Bases	Size	Published
SRR10956306	571,390	57.7M	19.7Mb	2020-02-04
SRR10956307	494,910	50M	17Mb	2020-02-04
SRR10956308	517,365	52.3M	19Mb	2020-02-04
SRR10956309	520,960	52.6M	18.7Mb	2020-02-04
SRR10956310	497,558	50.3M	18Mb	2020-02-04
SRR10956311	517,383	52.3M	17.3Mb	2020-02-04

ID:: 9950689

SRA

Sequence Read Archive

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