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SRX7724629: RNAseq of Manduca sexta fat body tissue: field R5.S35.T2 rep1 lane1
1 ILLUMINA (Illumina HiSeq 2500) run: 12.2M spots, 1.5G bases, 700.4Mb downloads

Design: Stranded mRNA libraries generated using the NEBNext Ultra Directional RNA Library Prep Kit
Submitted by: University of North Carolina at Chapel Hill
Study: Interactive Effects of Previous and Current Thermal Conditions on Gene Expression in Manduca sexta
show Abstracthide Abstract
This study performed RNA sequencing of fat body tissue from two populations of the tobacco hornworm caterpillar (Manduca sexta): a UNC-maintain laboratory colony and field population collected from eastern NC. The objective of this investigation was to evaluate the effects of diurnal temperature fluctuations (of 30 plus and minus 0, 5, or 10 degrees C) throughout development on larval gene expression both independently and in conjunction with subsequent thermal exposure (of 30, 35, or 40 degrees C). Results from differential expression analyses of these data highlight large differences in overall gene expression patterns between these two populations (across all temperature treatments) as well as population-specific transcriptomic responses to temperature. Exposure to fluctuating temperatures during rearing did alter gene expression during later heat stress in some cases, but this effect depended upon both the population and the specific temperature conditions. This research contributes to increased knowledge of molecular mechanisms underlying physiological responses of organisms to temperature, particularly with respect to thermal plasticity and adaptation in populations with different evolutionary histories.
Sample: RNAseq of Manduca sexta 5th instar larvae, NC field population
SAMN14101942 • SRS6146460 • All experiments • All runs
Organism: Manduca sexta
Library:
Name: field_R5.S35.T2_rep1_lane1
Instrument: Illumina HiSeq 2500
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: RANDOM
Layout: SINGLE
Runs: 1 run, 12.2M spots, 1.5G bases, 700.4Mb
Run# of Spots# of BasesSizePublished
SRR1108562912,159,4301.5G700.4Mb2020-03-19

ID:
10099532

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