RNA-sequencing of yellow-footed antechinus (Antechinus flavipes) tiss... - SRA

SRX7911771: RNA-sequencing of yellow-footed antechinus (Antechinus flavipes) tissue
1 BGISEQ (BGISEQ-500) run: 72.3M spots, 7.2G bases, 3.8Gb downloads

Design: Total RNA was extracted from frozen tissue by BGI (Hong Kong). RNA libraries were prepared for sequencing using standard BGISEQ-500 protocols (stranded mRNA library). Raw data were filtered using Flexbar v3.4.0 (PMID 28541403).

Submitted by: Nanjing Normal University

Study: Insights into the trade-off between reproductive effort and survival from mammals with an annual life-history

PRJNA565840 • SRP221861 • All experiments • All runs

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In this project, we will investigate the semelparous mammals of South America during their short, highly-synchronised breeding seasons. Unveiling the life-history of these enigmatic animals using genomic data (genomes, transcriptomes, and epigenomes) will deliver insights into the evolution of semelparity, the universal ageing process, and marsupial biology. Data generated in this study will be shared through the community resource http://www.semelparous.life, creating opportunities for future studies and aiding conservation efforts.

Sample: RNA-sequencing of yellow-footed antechinus (Antechinus flavipes) tissue

SAMN14377219 • SRS6319115 • All experiments • All runs

Organism: Antechinus flavipes

Library:

Name: MB021018St2

Instrument: BGISEQ-500

Strategy: RNA-Seq

Source: TRANSCRIPTOMIC

Selection: Oligo-dT

Layout: PAIRED

Runs: 1 run, 72.3M spots, 7.2G bases, 3.8Gb

Run	# of Spots	# of Bases	Size	Published
SRR11306620	72,277,788	7.2G	3.8Gb	2021-08-17

ID:: 10346706

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