RNA-Seq of walnut: embryo - SRA

SRX8652700: RNA-Seq of walnut: embryo
1 ILLUMINA (Illumina NovaSeq 6000) run: 28.9M spots, 8.7G bases, 2.6Gb downloads

Design: Total RNA was extracted from the samples using RNAprep Pure Plant kit (Tiangen, Beijing, China). RNA integrity was measured using the RNA Nano6000 Assay Kit of Bioanalyzer 2100 system (Agilent Technogies, CA, USA). Construction and deep-secquencing of RNA -seq libraries were performed at Novogene Bioinformatics Technology Co., Ltd (Beijing). Using the rRNA-depleted RNA by NEBNext RUltraTM Directional RNA library Prep Kit for Illumina R (NEB, USA), nearly 1 g RNA per sample was used for library preparation. Then all sequencing libraries were submitted for 150 bp paired-end sequencing on an Illumina NovaSeq 6000 platform.

Submitted by: Chinese Academy of Forestry

Study: Transcriptome analysis of Walnut (Juglans regia L.) Embryo and Endopleura

PRJNA643637 • SRP269656 • All experiments • All runs

show Abstracthide Abstract

Walnut (Juglans regia L.) is a widely cultivated woody tree species and its embryo is delicious and nutritious foods. Our transcriptome datas provide a valuable resource for the research of embryo and endopleura development and metabolite synthesis in walnut.

Sample:

SAMN15421000 • SRS6935801 • All experiments • All runs

Organism: Juglans regia

Library:

Name: B119_1

Instrument: Illumina NovaSeq 6000

Strategy: RNA-Seq

Source: TRANSCRIPTOMIC

Selection: PCR

Layout: PAIRED

Runs: 1 run, 28.9M spots, 8.7G bases, 2.6Gb

Run	# of Spots	# of Bases	Size	Published
SRR12131495	28,912,969	8.7G	2.6Gb	2020-12-31

ID:: 11251580

SRA

Sequence Read Archive

Result Filters

Send to:

Supplemental Content

Related information

Recent activity