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SRX8925437: RNA-seq of wild type castor: plant stem
1 ILLUMINA (Illumina NovaSeq 6000) run: 24.6M spots, 7.4G bases, 2.2Gb downloads

Design: Wild castor beans harvested from Africa, then cultivated in the greenhouse of Wuhan Botanical Garden.Tissue samples are collected when the plant is mature.
Submitted by: Wuhan Botanical Garden, University of Chinese Academy of Sciences
Study: Ricinus communis isolate:WT05 Genome sequencing and assembly
show Abstracthide Abstract
we collected and identified a superior wild castor , with higher oil content and larger seed size and weight compared with cultivars. This superior wild castor may provide important germplasm resources for the cultivation of new varieties of castor bean with high yield and high oil content. To investigate the genetic variations that controls the advantage phenotypes in the superior wild castor ,we assembled a chromosome-scale genomes of the superior wild castor using the Super-long read sequencing of Oxford nanopore technology and Hi-C sequencing, and performed comparative genomic and evolutionary studies with the inbred cultivar genome, Hale(ref) (NSL4773).Our research provides an important resource for future molecular breeding and evolutionary studies.
Sample: WT05_Stem3
SAMN15783678 • SRS7181556 • All experiments • All runs
Library:
Name: Stem_3_1
Instrument: Illumina NovaSeq 6000
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: Oligo-dT
Layout: PAIRED
Runs: 1 run, 24.6M spots, 7.4G bases, 2.2Gb
Run# of Spots# of BasesSizePublished
SRR1242960924,648,4237.4G2.2Gb2021-07-31

ID:
11599586

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