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SRX8969456: GSM4731995: NWK-F2-0-2; Fundulus heteroclitus; RNA-Seq
1 ILLUMINA (Illumina HiSeq 1000) run: 26.2M spots, 5.1G bases, 1.8Gb downloads

Submitted by: NCBI (GEO)
Study: Transcriptional response to embryonic PCB exposure in 8 killifish populations
show Abstracthide Abstract
Embryos from 8 populations of killifish, four with evolved tolerances, were exposed to PCB-126. Approximately 5 replicate embryos per treatment/control were sequenced. Desensitization of aryl hydrocarbon receptor signaling to PCB-126 is found in all four populations with evolved pollution tolerance, and represents the strongest transcriptional difference between tolerant and sensitive populations. Overall design: 4 populations with evolved tolerance (Bridgeport, Elizabeth River, New Bedford Harbor, and Newark) paired with a nearby sensitive population. One PCB-126 dose and 1 DMSO control, 5 replicates per treatment. Embryos were exposed from 1 day post fertilization to 10 days post fertilization (developmental stage 35).
Sample: NWK-F2-0-2
SAMN15856709 • SRS7225131 • All experiments • All runs
Library:
Instrument: Illumina HiSeq 1000
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: cDNA
Layout: PAIRED
Construction protocol: at 10 days post-fertilization, embryos were homogenized and total RNA was extracted using Trizol NEB Next Ultra RNA kit
Experiment attributes:
GEO Accession: GSM4731995
Links:
Runs: 1 run, 26.2M spots, 5.1G bases, 1.8Gb
Run# of Spots# of BasesSizePublished
SRR1247548626,177,8495.1G1.8Gb2020-08-20

ID:
11661964

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