RNA-seq of hemoglobin depleted polar bear whole blood transcriptome - SRA

SRX9421853: RNA-seq of hemoglobin depleted polar bear whole blood transcriptome
1 ILLUMINA (HiSeq X Ten) run: 36.4M spots, 11G bases, 4.1Gb downloads

Design: Modified Smart-seq2 protocol. Full-length cDNA generated using oligodT priming and template switching, depleted of hemoglobin transcripts using Long-DASH protocol, and fragmented for Illumina sequencing using Tn5 enzyme and Nextera oligos.

Submitted by: University of California, Santa Cruz

Study: Molecular investigation of polar bears (Ursus maritimus)

PRJNA669153 • SRP290891 • All experiments • All runs

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Genomic data (reference genome and resequencing) and transcriptomic data (RNA-seq) to investigate polar bear demography and ecology.

Sample:

SAMN16454152 • SRS7636926 • All experiments • All runs

Organism: Ursus maritimus

Library:

Name: PB14_depleted_Smart-seq2

Instrument: HiSeq X Ten

Strategy: RNA-Seq