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SRX9754419: Comparative Transcriptome Analysis Reveals Potential Testosterone Function-Related Regulatory Genes/Pathways of Leydig Cells in Immature and Mature Buffalo (Bubalus bubalis) Testes
1 BGISEQ (BGISEQ-500) run: 42.9M spots, 6.4G bases, 3.5Gb downloads

Design: RNA from buffalo immature Leydig cells (ILCs) and adult Leydig cells (ALCs) were isolated and sequenced using BGISEQ platform. Sequencing adapters were trimmed using trimmomatic and the filtered reads were mapped to the reference genome sequence assembly using HISAT.
Submitted by: Guangxi University
Study: Comparative Transcriptome Analysis Reveals Potential Testosterone Function-Related Regulatory Genes/Pathways of Leydig Cells in Immature and Mature Buffalo (Bubalus bubalis) Testes
show Abstracthide Abstract
RNA from buffalo immature Leydig cells (ILCs) and adult Leydig cells (ALCs) were isolated and sequenced using BGI DNBseq. We found that development of Leydig cells from ILCs to ALCs was associated with decreased expression of genes related to cell cycle, cell junction, adhesion and increased expression of genes related to steroidogenesis and lipid transport. Based on functional enrichment analysis and network analysis, cAMP pathway may play a key role in the testosterone function of the buffalo was characterized during ILC-to-ALC transition. In brief, our discoveries will enhance our understanding of developmental mechanism studies related to buffalo Leydig cells testosterone function.
Sample:
SAMN17182573 • SRS7944325 • All experiments • All runs
Organism: Bubalus bubalis
Library:
Name: ALC1
Instrument: BGISEQ-500
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: Oligo-dT
Layout: PAIRED
Runs: 1 run, 42.9M spots, 6.4G bases, 3.5Gb
Run# of Spots# of BasesSizePublished
SRR1332731342,877,0446.4G3.5Gb2021-09-27

ID:
12755437

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