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SRX2778426: Whole genome shotgun sequencing of Salmonella enterica subsp. enterica serovar Dublin by Illumina MiSeq
1 ILLUMINA (Illumina MiSeq) run: 531,859 spots, 207.7M bases, 111.8Mb downloads

External Id: EXT00258440
Design: MiSeq deep shotgun sequencing of cultured isolate.
Submitted by: FDA Center for Food Safety and Applied Nutrition (CFSAN)
Study: Foodborne Pathogen Survey
PRJNA191655 • SRP106080 • All experiments • All runs
show Abstracthide Abstract
Genome Sequencing Project
Sample: Pathogen: environmental/food/other sample from Salmonella enterica subsp. enterica serovar Dublin
SAMN01933088 • SRS2161684 • All experiments • All runs
Organism: Salmonella enterica subsp. enterica serovar Dublin
Library:
Name: Salmonella enterica subsp. enterica serovar Dublin Nextera XT shotgun
Instrument: Illumina MiSeq
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Construction protocol: Illumina Nextera XT library created for Salmonella enterica subsp. enterica serovar Dublin.
Spot descriptor:
1  forward251  reverse

Pipeline: show...hide...
NameStepPrev StepProgramVersion
base caller0NULLRTA1.8.5
demultiplexer10MiSeq Reporter2.3
Runs: 1 run, 531,859 spots, 207.7M bases, 111.8Mb
Run# of Spots# of BasesSizePublished
SRR5498105531,859207.7M111.8Mb2017-05-02

ID:
4006426

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