U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from BioSample

SRX5095201: GSM3500813: 1: rfpC_WL + Em; Chlorogloeopsis fritschii PCC 9212; RNA-Seq
1 ILLUMINA (Illumina HiSeq 2500) run: 8M spots, 400.4M bases, 179.1Mb downloads

Submitted by: NCBI (GEO)
Study: Chlorogloeopsis sp. PCC 9212 wild type and mutants in response to erythromycin and light colors
PRJNA508366 • SRP172485 • All experiments • All runs
show Abstracthide Abstract
This transcription profiling analysis of Chlorogloeopsis sp. PCC 9212 is designed to study the role of RfpA, RfpB, and RfpC in response to light color change Overall design: Chlorogloeopsis sp. PCC 9212 wild type and mutants cells were cultured in white light and far-red light with or without the supplement of erythromycin
Sample: 1: rfpC_WL + Em
SAMN10519754 • SRS4106788 • All experiments • All runs
Organism: Chlorogloeopsis fritschii PCC 9212
Library:
Instrument: Illumina HiSeq 2500
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: cDNA
Layout: SINGLE
Construction protocol: Cells were harvested, immediately frozen in liquid nitrogen, and stored at -80 oC. Total RNA was extracted with phenol and further purified with High Pure RNA Isolation Kit (Roche, Indianapolis,IN). Ribosomal RNA was removed using Ribo-Zero rRNA Removal Kit (Bacteria) (Illumina, Inc.) Library was generated by using the TruSeq Stranded mRNA Kit with skipping of poy(A) selection (Illumina, Inc.)
Experiment attributes:
GEO Accession: GSM3500813
Links:
Runs: 1 run, 8M spots, 400.4M bases, 179.1Mb
Run# of Spots# of BasesSizePublished
SRR82803688,008,522400.4M179.1Mb2018-12-06

ID:
6871663

Supplemental Content

Related information

Recent activity

Clear Turn Off Turn On

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...