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SRX6691517: 8_HV102_Meso
1 ILLUMINA (Illumina HiSeq 4000) run: 27.1M spots, 5.5G bases, 2.1Gb downloads

Design: Total RNA extracted from pooled tissue. PolyA enriched with oligo(dT) mRNA capture magnetic beads. RNA chemically fragmented. Library prepared with Stranded mRNA Kit (KAPA), hairpin adaptors (NEB), and unique-dual indices (Berkeley Genomics Laboratory QB3)
Submitted by: University of Connecticut
Study: Comparative tissue specific transcriptomes of Homalodisca vitripennis and Entylia carinata
show Abstracthide Abstract
We used RNA-Seq to test hypotheses for the origins of morphological novelty. Treehoppers (Hemiptera: Membracidae) are sap-sucking insects that fascinate naturalists due to their elaborate helmet, an enlarged projection of the 1st thoracic segment dorsal bodywall (the pronotum) that has been molded by natural selection into an array of structures aiding crypsis, mimicry, and/or aposematism. Members of their sister group, the leafhoppers (Cicadellidae), exhibit the plesiomorphic condition, having a flat, collar-like or shield-like pronotum. In recent literature morphologists and developmental biologists have held differing views of the developmental origin of the treehopper helmet. Evidence from gene expression in treehoppers, and RNA interference in other insects, suggest that co-option of genes in the wing patterning network may be involved, while evidence from anatomically similar beetle horns suggest the possibility of leg-patterning gene co-option. We tested these and other hypotheses with comparative transcriptomics to analyze gene expression in eight body regions of nymphal <i>Entylia carinata</i> (a treehopper) and <i>Homalodisca vitripennis</i> (a leafhopper).
Sample: 8_HV102_Meso
SAMN12306229 • SRS5249045 • All experiments • All runs
Library:
Name: HV102_Meso
Instrument: Illumina HiSeq 4000
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: Oligo-dT
Layout: PAIRED
Runs: 1 run, 27.1M spots, 5.5G bases, 2.1Gb
Run# of Spots# of BasesSizePublished
SRR994293327,087,2805.5G2.1Gb2019-11-25

ID:
8820846

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