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SRX6614478: Whole genome Illumina NextSeq sequence of Staphylococcus aureus
1 ILLUMINA (NextSeq 500) run: 1.7M spots, 494.6M bases, 214.3Mb downloads

External Id: EXT00365039
Design: NextSeq deep shotgun sequencing of cultured isolate.
Submitted by: FDA Center for Food Safety and Applied Nutrition (CFSAN)
Study: Antimicrobial Surveillance from Brigham & Women's Hospital, Boston MA
PRJNA278886 • SRP056445 • All experiments • All runs
show Abstracthide Abstract
The goal of this project is to identify carbapenemases and other beta-lactamases in clinical isolates with WGS and assess their mobilization potential . The results can support national surveillance of clinically identified pathogens and provide invaluable information to infection control in hospital.
Sample:
SAMN12414151 • SRS5187463 • All experiments • All runs
Organism: Staphylococcus aureus
Library:
Name: Nextera XT library SEQ000094846
Instrument: NextSeq 500
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Spot descriptor:
1  forward251  reverse

Runs: 1 run, 1.7M spots, 494.6M bases, 214.3Mb
Run# of Spots# of BasesSizePublished
SRR98606681,679,719494.6M214.3Mb2019-07-31

ID:
8725069

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