Illumina HiSeq 2500 sequencing; qiita_ptid_4582:10894.BL974 - SRA

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ERX3957258: Illumina HiSeq 2500 sequencing; qiita_ptid_4582:10894.BL974
1 ILLUMINA (Illumina HiSeq 2500) run: 8 spots, 1,000 bases, 29,206b downloads

Design: longitudinal series comparing CS and CS with seeding in moms and babies

Submitted by: University of California San Diego Microbiome Initiative (University of California San Diego Microbiome Init)

Study: MG_baby timeseries

PRJEB36857 • ERP120105 • All experiments • All runs

Sample: Development Ecology of the Human Microbiome-longitudinal study; 10894.BL974

SAMEA6584862 • ERS4349164 • All experiments • All runs

Organism: human skin metagenome

Library:

Name: 10894.BL974

Instrument: Illumina HiSeq 2500

Strategy: OTHER

Source: METAGENOMIC

Selection: PCR

Layout: SINGLE

Construction protocol: Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4

Experiment attributes: (show all 30 attributes...) (hide...)

barcode: CAAATTCGGGAT

center_name: NYU Langone

center_project_name: MG - longitudinal babies

extraction_robot: HOWE_KF3

extractionkit_lot: PM16E14

linker: GT

mastermix_lot: 443912

orig_name: BL974

pcr_primers: FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT

plating: GH

primer: GTGTGYCAGCMGCCGCGGTAA

primer_date: 10/23/16

primer_plate: 3

processing_robot: RIKE

project_name: MG_Baby

run_center: UCSDMI

run_date: 2/16/17

run_prefix: MG_Baby2_Lane6_S6_L006

runid: 170216_D00611_0439_BCAJ1MANXX_Knight_2

sample_plate: MG_Baby_Plate_107

sequencing_id: lane 6_170216_D00611_0439_BCAJ1MANXX_Knight_425

sequencing_meth: Sequencing by synthesis

target_gene: 16S rRNA

target_subfragment: V4

tm1000_8_tool: 108379Z

tm300_8_tool: 311318B

tm50_8_tool: 311426B

water_lot: RNBF2734

well_description: MG_Baby_Plate_107_BL974_A4

well_id: A4

Runs: 1 run, 8 spots, 1,000 bases, 29,206b

Run	# of Spots	# of Bases	Size	Published
ERR3949458	8	1,000	29,206b	2020-02-25

ID:: 10200561

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