U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from BioSample

DRX208028: Illumina MiSeq paired end sequencing of SAMD00211181
1 ILLUMINA (Illumina MiSeq) run: 32,707 spots, 19.6M bases, 11.2Mb downloads

Submitted by: UT-AQUA
Study: Metabarcoding analysis of planktonic copepdos in the Izu Ridge
show Abstracthide Abstract
This project aimed to characterize copepod community in the Izu Ridge region off Japan. Zooplankton samples were collected at 0-200 m using NORPAC net, and both DNA and RNA were extracted. After cDNA was synthesized, massive sequence data of 28S D2 region were obtained from both DNA and RNA (cDNA). Copepod communities were compared between the Izu Ridge and region off the ridge in order to identify key copepod species and their responses to complex environments in the Izu Ridge.
Sample: RNA from zooplankton community sample at C3330 during SY-15-10
SAMD00211181 • DRS128775 • All experiments • All runs
Library:
Instrument: Illumina MiSeq
Strategy: AMPLICON
Source: GENOMIC
Selection: PCR
Layout: PAIRED
Construction protocol:
Spot descriptor:
forward302  reverse

Runs: 1 run, 32,707 spots, 19.6M bases, 11.2Mb
Run# of Spots# of BasesSizePublished
DRR21769332,70719.6M11.2Mb2020-03-26

ID:
10443694

Supplemental Content