Whole genome resequencing of Zea mays subsp. mays inbred line PHW43 - SRA

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SRX9115849: Whole genome resequencing of Zea mays subsp. mays inbred line PHW43
1 ILLUMINA (HiSeq X Ten) run: 174.7M spots, 52.4G bases, 18Gb downloads

Design: Tissue from the newest leaf of five seedlings was collected and immediately flash frozen in liquid nitrogen. DNA was extracted using a standard cetyltrimethyl ammonium bromide (CTAB) DNA extraction protocol (Saghai-Maroof et al., 1984), and treated with 25 uL of RNase at 39 for 30 minutes. Genomic DNA for each genotype was submitted to Novogene (Novogene Co., Ltd., Beijing, China) for standard Illumina library construction.

Submitted by: University of Minnesota

Study: Maize Wisconsin Diversity Panel Resequencing Project

PRJNA661271 • SRP282292 • All experiments • All runs

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Resequencing of a subset (n=~450) of the maize Wisconsin Diversity Panel (Hansey et al., 2011) to ~20x sequencing depth with short read Illumina 150 bp paired-end reads.

Sample:

SAMN16053231 • SRS7358510 • All experiments • All runs

Organism: Zea mays subsp. mays

Library:

Name: GH17:1367_library

Instrument: HiSeq X Ten

Strategy: WGA

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Runs: 1 run, 174.7M spots, 52.4G bases, 18Gb

Run	# of Spots	# of Bases	Size	Published
SRR12633684	174,689,401	52.4G	18Gb	2020-09-15

ID:: 11850430

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