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ERX4589024: Illumina MiSeq paired end sequencing
1 ILLUMINA (Illumina MiSeq) run: 48,563 spots, 24.4M bases, 13.9Mb downloads

Submitted by: MAX PLANCK INSTITUTE FOR DEVELOPMENTAL BIOLOGY
Study: Psychrophilic species of the genus Psychrobacter are likely descendants of pathobionts
show Abstracthide Abstract
We measured growth under 24 different conditions for 85 accessions of Psychrobacter in tandem with whole genome sequencing and animal studies. We conducted comparative (phylo)genomics for these 85 Psychrobacter strains, as well as family-level comparative phylo-genomics. Our results indicate that growth at 37C is likely ancestral for the genus and is likely necessary for growth within mammalian bodies. Furthermore, Psychrobacter's closest relatives are pathobionts, and Psychrobacter likely evolved from a pathobiont ancestor.
Sample: PBF11.5a
SAMEA7383288 • ERS5141443 • All experiments • All runs
Organism: Ursus maritimus
Library:
Name: unspecified
Instrument: Illumina MiSeq
Strategy: AMPLICON
Source: METAGENOMIC
Selection: PCR
Layout: PAIRED
Runs: 1 run, 48,563 spots, 24.4M bases, 13.9Mb
Run# of Spots# of BasesSizePublished
ERR466624148,56324.4M13.9Mb2020-10-27

ID:
12246491

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