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SRX9697286: aeromonas_wgs_175
1 ILLUMINA (Illumina MiSeq) run: 7.5M spots, 2.2G bases, 611.6Mb downloads

Design: Nextera XT kit and sequenced on an Illumina MiSeq sequencer that generated 2x150 bp
Submitted by: Institut d'Investigacio Biomedica Sant Pau
Study: Taxonomic identification and characterization of antimicrobial resisncate mechanisms in Aeromonas
show Abstracthide Abstract
The genus Aeromonas contains some species that are potential human pathogens. These Aeromonas species are known to posses up to three different classes of chromosomal beta-lactamases. The production of beta -lactamases is one of the main causes of treatment failure. We used whole genome sequence analysis to identify our samples to the species level, previously identified by MALDI-ToF, and to characterize the chromosomal beta-lactamases of seven different Aeromonas species. We found some beta-lactamases to be species-specific and we also found differences in the number of beta-lactamases associated to each species.
Sample:
SAMN17101837 • SRS7893637 • All experiments • All runs
Organism: Aeromonas media
Library:
Name: 175_nextera_xt
Instrument: Illumina MiSeq
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Runs: 1 run, 7.5M spots, 2.2G bases, 611.6Mb
Run# of Spots# of BasesSizePublished
SRR132669107,483,4782.2G611.6Mb2021-02-08

ID:
12683092

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