U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from BioSample

ERX212278: Transcriptome Analysis of Aspergillus fumigatus Af293
1 ILLUMINA (Illumina HiSeq 2000) run: 8.7M spots, 1.3G bases, 709.1Mb downloads

Design: Illumina sequencing of library 5400922, constructed from sample accession ERS132613 for study accession ERP001382. This is part of an Illumina multiplexed sequencing run (8055_2). This submission includes reads tagged with the sequence GATCAG.
Submitted by: The Wellcome Trust Sanger Institute (SC)
Study: Aspergillus_fumigatus_and_invasive_aspergillosis
show Abstracthide Abstract
Aspergillus fumigatus infection is responsible for approximately 4% of all hospital-based deaths in Europe. The organism is an opportunistic fungal pathogen of immunocompromised patients and is the commonest etiological agent of invasive aspergillosis (IA). Gliotoxin is produced by A. fumigatus and is primarily described in terms of its cytotoxicity towards animal cells. In our recent work [1] and preliminary data suggests that significant new thinking is necessary to understand the role of gliotoxin in A. fumigatus because, under certain conditions, it appears to induce major redox dysregulation in the organism. We were the first to demonstrate that gliT, a gliotoxin oxidoreductase gene in the gliotoxin (gli) biosynthetic cluster, is essential to protect A. fumigatus against the deleterious effects of exogenously- added gliotoxin. However, the precise mechanism of gliotoxin self-protection, and trans effects of gliotoxin presence, remain obscure.
Sample:
SAMEA1710258 • ERS132613 • All experiments • All runs
Library:
Name: 5400922
Instrument: Illumina HiSeq 2000
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: cDNA
Layout: PAIRED
Construction protocol: Illumina cDNA protocol
Runs: 1 run, 8.7M spots, 1.3G bases, 709.1Mb
Run# of Spots# of BasesSizePublished
ERR2377428,731,2201.3G709.1Mb2013-03-18

ID:
341591

Supplemental Content

Recent activity