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SRX12436774: Whole genome sequence of seed-borne bacteria
1 ILLUMINA (Illumina HiSeq 2500) run: 902,901 spots, 433.7M bases, 145.8Mb downloads

Design: The goal of the project is to uncover genome sequences of bacteria that show biocontrol activity of plant pathogens. Bacteria were isolated from several plant species including Medicago truncatula, Solanum lycopersicum (tomato) and Solanum tuberosum (potato). Isolated bacteria fall into two different groups: Bacillus and Xanthomonas. We intend to do comparative genomics to find out differences and similarities in genomes of these bacteria.
Submitted by: Cebtre of Biotechnology of Borj Cdedria
Study: Whole genome sequencing of biocontrol bacteria
show Abstracthide Abstract
The goal of the project is to uncover genome sequences of bacteria that show biocontrol activity of plant pathogens. Bacteria were isolated from several plant species including Medicago truncatula, Solanum lycopersicum (tomato) and Solanum tuberosum (potato). Isolated bacteria fall into two different groups: Bacillus and Xanthomonas. We intend to do comparative genomics to find out differences and similarities in genomes of these bacteria.
Sample:
SAMN21907814 • SRS10404053 • All experiments • All runs
Library:
Name: SMLR1
Instrument: Illumina HiSeq 2500
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Runs: 1 run, 902,901 spots, 433.7M bases, 145.8Mb
Run# of Spots# of BasesSizePublished
SRR16151919902,901433.7M145.8Mb2021-10-03

ID:
16862074

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