Amp-Seq of 12S, 18S, ANML, and SFF gene markers from Vampyrum spectru... - SRA

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SRX13289118: Amp-Seq of 12S, 18S, ANML, and SFF gene markers from Vampyrum spectrum faeces: Replicate_5F
1 ILLUMINA (Illumina MiSeq) run: 45,986 spots, 27.7M bases, 17.4Mb downloads

Design: We collected faeces from the guano pile at the bottom of a three individal communal roost. Sample was collected upon discovery of the roost and might represent multi-day depositions

Submitted by: Northern Arizona University

Study: Diet of Vampyrum spectrum from Nicaragua using DNA metabarcoding with 12S, 18S, ANML, and SFF markers

PRJNA785628 • SRP348957 • All experiments • All runs

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We use four primers in 16 fecal samples collected at a communal roost of Vampyrum spectrum (Spectral Bat) in the Pacific Lowland Dry Forest of Nicaragua in 2017. Markers used follow ANML (Jusino et al., 2019), 12S (Klymus et al., 2017), 18S (Kounosu et al., 2019) and SFF (Walker et al., 2016, 2019).

Sample: Fecal sample collected upon discovery of V. spectrum roost

SAMN23572428 • SRS11201845 • All experiments • All runs

Organism: Vampyrum spectrum

Library:

Name: VASP_5F

Instrument: Illumina MiSeq

Strategy: AMPLICON

Source: METAGENOMIC

Selection: PCR

Layout: PAIRED

Runs: 1 run, 45,986 spots, 27.7M bases, 17.4Mb

Run	# of Spots	# of Bases	Size	Published
SRR17101455	45,986	27.7M	17.4Mb	2021-12-02

ID:: 18172773

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