Amp-Seq of 12S, 18S, ANML, and SFF gene markers from Vampyrum spectru... - SRA

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SRX13289126: Amp-Seq of 12S, 18S, ANML, and SFF gene markers from Vampyrum spectrum faeces: Replicate_12F
1 ILLUMINA (Illumina MiSeq) run: 89,402 spots, 53.8M bases, 31.8Mb downloads

Design: We collected faeces from the guano pile at the bottom of a three individal communal roost. Sample was collected a day after discovery of the roost and represent <24h depositions

Submitted by: Northern Arizona University

Study: Diet of Vampyrum spectrum from Nicaragua using DNA metabarcoding with 12S, 18S, ANML, and SFF markers

PRJNA785628 • SRP348957 • All experiments • All runs

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We use four primers in 16 fecal samples collected at a communal roost of Vampyrum spectrum (Spectral Bat) in the Pacific Lowland Dry Forest of Nicaragua in 2017. Markers used follow ANML (Jusino et al., 2019), 12S (Klymus et al., 2017), 18S (Kounosu et al., 2019) and SFF (Walker et al., 2016, 2019).

Sample: Fecal sample collected within 24hrs after discovery of V. spectrum roost

SAMN23572442 • SRS11201853 • All experiments • All runs

Organism: Vampyrum spectrum

Library:

Name: VASP_12F

Instrument: Illumina MiSeq

Strategy: AMPLICON

Source: METAGENOMIC

Selection: PCR

Layout: PAIRED

Runs: 1 run, 89,402 spots, 53.8M bases, 31.8Mb

Run	# of Spots	# of Bases	Size	Published
SRR17101447	89,402	53.8M	31.8Mb	2021-12-02

ID:: 18172781

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