Nanopore sequencing of Cataglyphis hispanica:Chis2 - SRA

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SRX13652504: Nanopore sequencing of Cataglyphis hispanica:Chis2
1 OXFORD_NANOPORE (MinION) run: 1.5M spots, 5.1G bases, 3.9Gb downloads

Design: Nanopore libraries were prepared using rapid sequencing kits (SQK-RAD001 and SQK-RAD004). The resulting long read libraries were sequenced on 2 MIN106 flow cells and basecalled using Albacore v2.1.10.

Submitted by: Universite Libre de Bruxelles

Study: Cataglyphis hispanica isolate:Lineage 2 Genome sequencing

PRJNA792957 • SRP353959 • All experiments • All runs

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We generated high-quality chromosome-level genome assemblies for two hybridogenetic lineages of the Iberian ant Cataglyphis hispanica using Oxford Nanopore long reads, Illumina short reads, and proximity ligation (Hi-C). These new reference genomes pave the way for exploring the genetic mechanisms underlying the remarkable thermal tolerance of Catalgpyhis desert ants.

Sample: Chis2_ONT

SAMN24719597 • SRS11538512 • All experiments • All runs

Organism: Cataglyphis hispanica

Library:

Name: Chis2_ONT

Instrument: MinION

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: SINGLE

Runs: 1 run, 1.5M spots, 5.1G bases, 3.9Gb

Run	# of Spots	# of Bases	Size	Published
SRR17481979	1,471,684	5.1G	3.9Gb	2022-01-07

ID:: 18988054

SRA

Sequence Read Archive

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