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DRX215534: Illumina HiSeq 3000 paired end sequencing of SAMD00220316
1 ILLUMINA (Illumina HiSeq 3000) run: 80.2M spots, 16G bases, 5.5Gb downloads

Submitted by: NIBB
Study: Mnase and ATACsea analaysis with KO cells
show Abstracthide Abstract
Eukaryotic genomic DNA is highly packaged as nucleosomes. The nucleosome positioning affects its accessibility on genomic DNA, where DNA binding proteins such as transcription factors bind to regulate genome functions. Therefore, chromatin accessibility of regulatory elements such as promoters and enhancers are crucial for gene expression activity. Here we performed ATAC-seq and MNase-seq analysis to analys the effects of knockout of regulators.
Sample: MS-DP1KO-1_MNase-Seq, YMSI011
SAMD00220316 • DRS235585 • All experiments • All runs
Organism: Homo sapiens
Library:
Name: YMSI011_MS-DP1KO-1
Instrument: Illumina HiSeq 3000
Strategy: MNase-Seq
Source: GENOMIC
Selection: MNase
Layout: PAIRED
Construction protocol:
Spot descriptor:
forward101  reverse

Runs: 1 run, 80.2M spots, 16G bases, 5.5Gb
Run# of Spots# of BasesSizePublished
DRR22524980,154,54516G5.5Gb2022-04-13

ID:
21263448

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