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DRX338193: DNBSEQ-G400 paired end sequencing of SAMD00446165
1 DNBSEQ (DNBSEQ-G400) run: 34.7M spots, 10.4G bases, 6.4Gb downloads

Submitted by: NAGASAKI
Study: RNA-seq of Plasmodium knowlesi
show Abstracthide Abstract
To evaluate if Plasmodium knowlesi-iRBCs could bind to human endothelial cells, we repeatedly panned monkey RBCs infected with a wild type P. knowlesi on HUVECs. We performed 2 selection experiments, exp-1 and exp-2. We obtained 2 cytoadherent P. knowlesi samples (6th pan and 8th pan) and 2 control samples (pre-1 and pre-2) in the exp-1, and 2 cytoadherent P. knowlesi samples (well-1 and well-2) and 1 control sample (pre-3) in the exp-2. Then we performed RNA-sequencing (RNA-seq) of these 7 samples at 3 different time points (4h, 8h, and 24h after invasion) to identify differentially expressed genes.
Sample: Cytoadherent P. knowlesi of well-2_3 months later at 24h
SAMD00446165 • DRS244810 • All experiments • All runs
Library:
Instrument: DNBSEQ-G400
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: Oligo-dT
Layout: PAIRED
Construction protocol:
Spot descriptor:
forward151  reverse

Runs: 1 run, 34.7M spots, 10.4G bases, 6.4Gb
Run# of Spots# of BasesSizePublished
DRR35228234,728,17610.4G6.4Gb2022-07-04

ID:
22691947

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