Bangladesh ground water March 2009 - SRA

Links from BioSample

SRX691249: Bangladesh ground water March 2009
1 ILLUMINA (Illumina HiSeq 2000) run: 4.1M spots, 833.6M bases, 492.1Mb downloads

Design: A whole genome shotgun library was prepared using the Nextera DNA library preparation kit (Illumina) from DNA extracted from 9 Bara Haldia wells sampled March 2009 (21750, 21757, 21764, 21774, 21775, 21786, 21787, 21793 and 21794). In these wells, during this sampling period, E. coli concentrations ranged from <1 to 100 MPN/100mls and arsenic concentrations ranged from <1 to 218 ppb.

Submitted by: University of Tennessee

Study: Bangladesh Surface and Ground Water Metagenomes

PRJNA260804 • SRP047074 • All experiments • All runs

show Abstracthide Abstract

Drinking water in parts of Bangladesh may be contaminated with arsenic and/or water-borne pathogens. Metagenomes from surface water and ground water samples were generated to provide genetic information on microbial arsenic metabolic pathways and to search for potential water-borne pathogens.

Sample: well water March 2009

SAMN03014527 • SRS693706 • All experiments • All runs

Organism: aquatic metagenome

Library:

Name: BaraHaldiaGW0309

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: METAGENOMIC

Selection: unspecified

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Runs: 1 run, 4.1M spots, 833.6M bases, 492.1Mb

Run	# of Spots	# of Bases	Size	Published
SRR1563167	4,126,758	833.6M	492.1Mb	2014-10-01

ID:: 973275

SRA

Sequence Read Archive

Result Filters

Send to:

Links from BioSample

Supplemental Content

Related information

Recent activity