Bangladesh ground water January 2011 - SRA

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SRX699551: Bangladesh ground water January 2011
1 ILLUMINA (Illumina HiSeq 2000) run: 14.6M spots, 2.9G bases, 1.7Gb downloads

Design: A whole genome shotgun library was prepared using the Nextera DNA library preparation kit (Illumina) from DNA extracted from 11 Bara Haldia wells sampled January 2011 (21750, 21757, 21764, 21774, 21775, 21786, 21787, 21790, 21792, 21793 and 21794). In these wells, during this sampling period, E. coli concentrations ranged from <1 to 42 MPN/100mls and arsenic concentrations ranged from <1 to 218 ppb.

Submitted by: University of Tennessee

Study: Bangladesh Surface and Ground Water Metagenomes

PRJNA260804 • SRP047074 • All experiments • All runs

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Drinking water in parts of Bangladesh may be contaminated with arsenic and/or water-borne pathogens. Metagenomes from surface water and ground water samples were generated to provide genetic information on microbial arsenic metabolic pathways and to search for potential water-borne pathogens.

Sample: well water November 2011

SAMN03014531 • SRS699405 • All experiments • All runs

Organism: aquatic metagenome

Library:

Name: BaraHaldiaGW0111

Instrument: Illumina HiSeq 2000

Strategy: WGA

Source: METAGENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Runs: 1 run, 14.6M spots, 2.9G bases, 1.7Gb

Run	# of Spots	# of Bases	Size	Published
SRR1573565	14,566,759	2.9G	1.7Gb	2014-10-01

ID:: 985205

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