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DRX377282: HiSeq X Ten paired end sequencing of SAMD00507669
1 ILLUMINA (HiSeq X Ten) run: 4.1M spots, 1.2G bases, 459.2Mb downloads

Submitted by: TOHOKUGL
Study: Phylogeography of Schlegel's Japanese gecko
show Abstracthide Abstract
distribution of organisms was formed from the past is an essential issue in evolutionary ecology. Recently, the distribution of organisms on Earth has been significantly changed by human-mediated dispersal with globalization. Therefore, significant attention has been paid to such processes. However, although humankind had taken considerable time to achieve modernization, the impact of ancient human activity on ecosystems had not yet been thoroughly studied. We hypothesized that ancient urban development and transitions had a non-negligible effect on species distribution.Considering that Schlegel's Japanese gecko, Gekko japonicus, one of the popular neighbors of human dwellings in Japan, is a good model for this, we sequenced these genes. By analyzing these sequence data, we clarify the history of the origin and dispersal of G. japonicus in the Japanese archipelago, showing that ancient human-organism interactions can be an essential factor in understanding the present distribution of organisms.
Sample: GJFKE2
SAMD00507669 • DRS267146 • All experiments • All runs
Organism: Gekko japonicus
Library:
Instrument: HiSeq X Ten
Strategy: RAD-Seq
Source: GENOMIC
Selection: Restriction Digest
Layout: PAIRED
Construction protocol:
Spot descriptor:
forward201  reverse

Pipeline: show...hide...
StepPrev Step
1NIL
Runs: 1 run, 4.1M spots, 1.2G bases, 459.2Mb
Run# of Spots# of BasesSizePublished
DRR3914224,128,1201.2G459.2Mb2022-12-01

ID:
25483065

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