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SRX905586: Whole genome shotgun sequencing of Salmonella enterica subsp. enterica serovar Heidelberg str. FL-NRM284 by Illumina MiSeq
1 ILLUMINA (Illumina MiSeq) run: 624,295 spots, 265.1M bases, 146.6Mb downloads

Design: MiSeq deep shotgun sequencing of cultured isolate.
Submitted by: FOOD AND DRUG ADMINISTRATION, CENTER FOR FOOD SAFETY AND APPLIED NUTRITION (CFSAN)
Study: GenomeTrakr Project: Florida Department of Health, University of Florida
PRJNA183848 • SRP028812 • All experiments • All runs
show Abstracthide Abstract
Currently encompasses whole genome sequencing of cultured pathogens as part of a surveillance project for the rapid detection of outbreaks of foodborne illnesses
Sample:
3269399 • SRS966050 • All experiments • All runs
Organism: Salmonella enterica subsp. enterica serovar Heidelberg
Library:
Name: Salmonella enterica str. FL-NRM284 shotgun
Instrument: Illumina MiSeq
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Construction protocol: Illumina Nextera XT library created for Salmonella enterica subsp. enterica serovar Heidelberg str. FL-NRM284.
Spot descriptor:
1  forward251  reverse

Pipeline: show...hide...
NameStepPrev StepProgramVersion
base caller0NULLRTA1.18.54
Runs: 1 run, 624,295 spots, 265.1M bases, 146.6Mb
Run# of Spots# of BasesSizePublished
SRR1849405624,295265.1M146.6Mb2015-06-19

ID:
1303674

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