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SRX19135900: Illumina DNA Seq of Human Cytomegalovirus: UL135stopUL136mycDK->R genome
1 ILLUMINA (NextSeq 2000) run: 1.7M spots, 498.4M bases, 151.6Mb downloads

Design: Sample libraries were prepared using the Illumina DNA Prep kit and IDT 10bp UDI indices, and sequenced on an Illumina NextSeq 2000, producing 2x151bp reads. Demultiplexing, quality control and adapter trimming was performed with bcl-convert (v3.9.3)
Submitted by: University of Arizona
Study: UL135 and UL136 Epistasis Controls Reactivation of Human Cytomegalovirus
show Abstracthide Abstract
Human cytomegalovirus (HCMV) is one of nine human herpesviruses and a significant human pathogen. While HCMV establishes a life-long latent infection that is typically asymptomatic in healthy individuals, its reactivation from latency can have devastating consequences in the immune compromised. Defining virus-host and virus-virus interactions important for HCMV latency, reactivation and replication is critical to defining the molecular basis of latent and replicative states and in controlling infection and CMV disease. Here we define a genetic relationship between two viral genes in controlling virus reactivation from latency using primary human hematopoietic cell and humanized mouse models.
Sample:
SAMN32866790 • SRS16547443 • All experiments • All runs
Organism: Herpesviridae
Library:
Name: 007
Instrument: NextSeq 2000
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Runs: 1 run, 1.7M spots, 498.4M bases, 151.6Mb
Run# of Spots# of BasesSizePublished
SRR231854891,666,506498.4M151.6Mb2023-08-03

ID:
26330731

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