WGS of sugarcane factory bacterial isolate - SRA

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SRX19839807: WGS of sugarcane factory bacterial isolate
1 ILLUMINA (Illumina MiSeq) run: 740,277 spots, 444.2M bases, 217.5Mb downloads

Design: Isolates were inoculated into 10 mL MRS or TGY broth and grown at 28 C overnight with 250 rpm shaking for DNA extraction using a Zymo Quick-DNA Fungal/Bacterial Miniprep kit. The DNA was further purified with a Zymo Clean and Concentrator-5 kit to improve the purity. Approximately 2 g were submitted for sequencing by the Texas A&M AgriLife Research: Genomics and Bioinformatics Service. Barcoded libraries were prepared using a PerkinElmer NEXTFLEX Rapid XP DNA-Seq Kit HT, pooled, and sequenced on an Illumina Miseq platform with v3 chemistry for 2 x 300 bp reads.

Submitted by: USDA-ARS

Study: Draft genomes of 17 bacterial isolates from Louisiana sugarcane raw sugar factory juices and biofilms.

PRJNA950990 • SRP430360 • All experiments • All runs

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We report the draft genomes for 17 bacterial isolates belonging to the genera Gluconobacter, Leuconostoc, and Pantoea that were obtained from Louisiana sugarcane raw sugar factory juice and biofilm samples.

Sample:

SAMN34031478 • SRS17198405 • All experiments • All runs

Organism: Leuconostoc suionicum

Library:

Name: LASM45

Instrument: Illumina MiSeq

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Runs: 1 run, 740,277 spots, 444.2M bases, 217.5Mb

Run	# of Spots	# of Bases	Size	Published
SRR24037249	740,277	444.2M	217.5Mb	2023-03-31

ID:: 27196709

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